Structural analysis of expressed sequence tags inimmature seed of Oryza sativa L.
نویسندگان
چکیده
منابع مشابه
A Quantitative Acetylomic Analysis of Early Seed Development in Rice (Oryza sativa L.)
PKA (protein lysine acetylation) is a critical post-translational modification that regulates various developmental processes, including seed development. However, the acetylation events and dynamics on a proteomic scale in this process remain largely unknown, especially in rice early seed development. We report the first quantitative acetylproteomic study focused on rice early seed development...
متن کاملFunctional analysis of the structural domain of ARF proteins in rice (Oryza sativa L.)
Auxin response factors (ARFs) are key regulators of plant growth and development. Through interaction with auxin/indole acetic acid (Aux/IAA) proteins, they influence the expression of auxin response genes. An ARF gene family has been predicted in rice, but the functions of the individual structural domains of the OsARFs remain obscure. Bioinformatics was used to analyse the position of the DNA...
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Expressed sequence tags (ESTs) present a special set of problems for bioinformatic analysis. They are partial and error-prone, and large datasets can have significant internal redundancy. To facilitate analysis of small EST datasets from in-house projects, we present an integrated "pipeline" of tools that take EST data from sequence trace to database submission. These tools also can be used to ...
متن کاملExpressed Sequence Tags
Now a days, genome analysis has employed a rapid analysis tool known as expressed sequence tags. In 1983, SD Putney for the first time demonstrated the use of cDNA in identification of genome. The term expressed sequence tags (ESTs) was coined by Anthony Kerlavage at the Institute for Genomic Research. In 1991, Mark Adams used EST in relation to gene discovery and Human Genome project. cDNA or ...
متن کاملWavelet Profiles: Their Application in Oryza sativa DNA Sequence Analysis
Here we introduce our application of the wavelet analysis method to DNA sequences. In the signal processing field, Fourier transform is popular for analyzing wave data. However, although this method can process frequency information, it fails to handle locational data. In contrast, the wavelet method accommodates both locational and frequency information for wave analysis. The wavelet method is...
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ژورنال
عنوان ژورنال: Journal of Plant Biotechnology
سال: 2009
ISSN: 1229-2818
DOI: 10.5010/jpb.2009.36.2.130